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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13085344_13090460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13085344 - 13090460

Intron Length:

5117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTCTCA

Flanking Amino Acid:

DEESPHAKERGPGDNHWSYE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

62.5

43.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

76.9

0.61

75.7

33.1

Minor 5ss

25.9

-2.8

2.9

30.2

42.8

Minor BPS

-0

3.6

83.19

37.9

Associated Gene:

Gene:

CA9

Ensembl Gene ID:

ENSAPLG00000021968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037475

13085170 - 13096991

11822

ENSAPLT00000031396

13085170 - 13096727

11558