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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13091554_13093431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13091554 - 13093431

Intron Length:

1878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCG

5'SS Class:

major

3'SS Sequence:

TCCTGCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TTTTACTGACCG

Flanking Amino Acid:

KFKLKNNGHTVVLDLPESMA

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

65.8

40.2

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

71.9

0.49

0.8

65.3

30.5

Minor 5ss

26.2

-2.7

3.2

31.7

42.8

Minor BPS

54.6

0.01

69.51

43.4

Associated Gene:

Gene:

CA9

Ensembl Gene ID:

ENSAPLG00000021968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031396

13085170 - 13096727

11558

ENSAPLT00000037475

13085170 - 13096991

11822