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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13093575_13093953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13093575 - 13093953

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTGCAT

U12 Branch Point Sequence:

GGTGCCCAACCT

Flanking Amino Acid:

TVNRKRFAGELHVVHYNTKY

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

50.1

1.4

43.2

Major PPT

83.2

0.75

0.8

74.4

36.5

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

42.5

-0.4

2.2

61.99

47.3

Associated Gene:

Gene:

CA9

Ensembl Gene ID:

ENSAPLG00000021968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037475

13085170 - 13096991

11822

ENSAPLT00000031396

13085170 - 13096727

11558