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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13094285_13094485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13094285 - 13094485

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTGCCCTCACTC

Flanking Amino Acid:

IKHLQKIQGEDEEVMVPGFN

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.7

31.9

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

47.2

-0.2

1.8

55.63

43.1

Associated Gene:

Gene:

CA9

Ensembl Gene ID:

ENSAPLG00000021968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037475

13085170 - 13096991

11822

ENSAPLT00000031396

13085170 - 13096727

11558