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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13096390_13096511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13096390 - 13096511

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTGGGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

CGCCCCGTGACG

Flanking Amino Acid:

AGQTSSSFHAGDVLAVVFGV

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

48.6

-0

1.2

40.4

Major PPT

66.8

0.38

57.5

43.2

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

45.8

-0.4

2.1

48.58

45.1

Associated Gene:

Gene:

CA9

Ensembl Gene ID:

ENSAPLG00000021968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037475

13085170 - 13096991

11822