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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13096606_13096752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13096606 - 13096752

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCACGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TCTGCCCTAACA

Flanking Amino Acid:

YVYKQRSQNARLDSPTKSKV

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

63.6

0.31

55.6

Minor 5ss

29.4

-2.4

3.2

40.9

45.4

Minor BPS

64.9

0.46

1.8

75.88

41.5

Associated Gene:

Gene:

CA9

Ensembl Gene ID:

ENSAPLG00000021968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037475

13085170 - 13096991

11822