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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13098712_13098903_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13098712 - 13098903

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCACCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTTCCCCCCACC

Flanking Amino Acid:

VLMHLAVSGSTFWNPLYVGS

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

72.7

0.56

30.1

Major PPT

63.9

0.31

0.8

53.9

29.3

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

47.5

-0.2

2.3

69.49

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027877

13097584 - 13101552

3969