Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13099259_13099365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13099259 - 13099365

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

TGGGGTGTCACG

Flanking Amino Acid:

SPISIQQMAYVAGVGFGLMS

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

70.4

0.46

66.1

35.9

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

34.4

-1.3

2.5

38.58

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027877

13097584 - 13101552

3969