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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13106000_13106347_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13106000 - 13106347

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GGGGCAGGTTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGGGCAG

U12 Branch Point Sequence:

TTGGGGGCAGGT

Flanking Amino Acid:

LKSLEAQADKGRPHHTRPLL

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

31.5

-1.1

1.6

28.5

45.1

Major PPT

48.2

-0.1

1.1

39.8

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

-1.9

2.6

42.86

47.1

Associated Gene:

Gene:

TPM2

Ensembl Gene ID:

ENSAPLG00000004483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022802

13103347 - 13114226

10880