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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13106218_13106855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13106218 - 13106855

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCGGGG

5'SS Class:

major

3'SS Sequence:

TGTGTCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

ACGGACGTATCT

Flanking Amino Acid:

LKSLIASEEEYSTKEDKYEE

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

49.8

46.9

Major BPS

52.1

0.05

1.3

41.8

Major PPT

77.4

0.62

0.9

70.4

36.3

Minor 5ss

33.1

-1.9

3.7

46.9

48.5

Minor BPS

-0.6

2.3

54.54

47.1

Associated Gene:

Gene:

TPM2

Ensembl Gene ID:

ENSAPLG00000004483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012870

13103347 - 13109945

6599