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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13106424_13107114_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13106424 - 13107114

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTTGGGATGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

CCTTCCCCACGC

Flanking Amino Acid:

RSEERAEVAESKCGDLEEEL

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

57.8

0.18

1.1

50.6

43.1

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

40.2

-0.7

2.2

50.8

46.1

Associated Gene:

Gene:

TPM2

Ensembl Gene ID:

ENSAPLG00000004483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022802

13103347 - 13114226

10880

ENSAPLT00000004598

13104296 - 13114226

9931

ENSAPLT00000031494

13105473 - 13114226

8754