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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13107186_13107283_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13107186 - 13107283

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ATGCCACCAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCTTTTTGATG

Flanking Amino Acid:

AEEADRKYEEVARKLVVLEG

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.5

35.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

59.7

0.22

52.5

36.4

Minor 5ss

27.4

-2.6

3.2

35.6

41.2

Minor BPS

63.2

0.27

1.3

64.87

38.1

Associated Gene:

Gene:

TPM2

Ensembl Gene ID:

ENSAPLG00000004483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004598

13104296 - 13114226

9931

ENSAPLT00000031494

13105473 - 13114226

8754

ENSAPLT00000022802

13103347 - 13114226

10880

ENSAPLT00000012870

13103347 - 13109945

6599