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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13113476_13114112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13113476 - 13114112

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAC

U12 Branch Point Sequence:

CACCCCATAACC

Flanking Amino Acid:

KKQAEDRCKQLEEEQQGLQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

0.08

1.1

55.6

Major PPT

74.1

0.54

0.8

67.9

32.2

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

55.6

0.16

1.7

62.16

42.7

Associated Gene:

Gene:

TPM2

Ensembl Gene ID:

ENSAPLG00000004483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031494

13105473 - 13114226

8754

ENSAPLT00000022802

13103347 - 13114226

10880

ENSAPLT00000004598

13104296 - 13114226

9931