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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13126951_13127177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13126951 - 13127177

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCAAT

U12 Branch Point Sequence:

AGTCTCCCAATG

Flanking Amino Acid:

VDSITQAINQLDEGPMGEPE

Intron Amino Acid Position:

1890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

59.3

0.23

1.3

66.9

37.7

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

44.3

-0.5

1.8

49.08

38.3

Associated Gene:

Gene:

TLN1

Ensembl Gene ID:

ENSAPLG00000004508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004677

13118633 - 13139647

21015

ENSAPLT00000004695

13117449 - 13139647

22199

ENSAPLT00000004681

13117449 - 13144432

26984