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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13129008_13129108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13129008 - 13129108

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTTGG

5'SS Class:

strong_major

3'SS Sequence:

ATCTCCACGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TGGATCTCATCT

Flanking Amino Acid:

STANLVKTIKALDGAFNEEN

Intron Amino Acid Position:

1597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

67.5

40.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

63.6

0.31

55.8

39.4

Minor 5ss

40.2

-1.1

2.7

49.2

47.1

Minor BPS

47.9

-0

1.8

65.47

44.8

Associated Gene:

Gene:

TLN1

Ensembl Gene ID:

ENSAPLG00000004508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004695

13117449 - 13139647

22199

ENSAPLT00000004681

13117449 - 13144432

26984

ENSAPLT00000004677

13118633 - 13139647

21015