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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13129271_13129376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13129271 - 13129376

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CCTGCCTCACCC

Flanking Amino Acid:

LVDPACTQSQVLSAATIVAK

Intron Amino Acid Position:

1543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

0.61

0.7

68.9

31.6

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

47.8

-0.1

57.89

47.1

Associated Gene:

Gene:

TLN1

Ensembl Gene ID:

ENSAPLG00000004508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004677

13118633 - 13139647

21015

ENSAPLT00000004695

13117449 - 13139647

22199

ENSAPLT00000004681

13117449 - 13144432

26984