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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13129742_13129848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13129742 - 13129848

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAG

U12 Branch Point Sequence:

TGGTCTCCAGCT

Flanking Amino Acid:

CLDSVMENSKVLGESMAGIS

Intron Amino Acid Position:

1454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

46.3

-0.2

1.7

60.4

45.8

Major PPT

69.1

0.43

62.2

39.8

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

45.4

-0.2

65.85

44.5

Associated Gene:

Gene:

TLN1

Ensembl Gene ID:

ENSAPLG00000004508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004695

13117449 - 13139647

22199

ENSAPLT00000004681

13117449 - 13144432

26984

ENSAPLT00000004677

13118633 - 13139647

21015