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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13131456_13131552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13131456 - 13131552

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGACCG

5'SS Class:

major

3'SS Sequence:

TTGTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CCTTGCTCAGGT

Flanking Amino Acid:

DPDSQQRLVQVAKAVSQALN

Intron Amino Acid Position:

1240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

43.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

0.74

0.8

77.6

31.1

Minor 5ss

25.4

-2.8

3.1

30.4

42.9

Minor BPS

41.8

-0.5

2.3

59.42

49.6

Associated Gene:

Gene:

TLN1

Ensembl Gene ID:

ENSAPLG00000004508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004681

13117449 - 13144432

26984

ENSAPLT00000004677

13118633 - 13139647

21015

ENSAPLT00000004695

13117449 - 13139647

22199