Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13139171_13139467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13139171 - 13139467

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGCAG

5'SS Class:

major

3'SS Sequence:

GTCTGTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

AGCCCCTCACCC

Flanking Amino Acid:

TYGVSFFLVKEKMKGKNKLV

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

53.8

44.9

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

71.8

0.49

0.9

64.8

36.6

Minor 5ss

28.1

-2.5

3.5

37.1

47.5

Minor BPS

47.4

-0.2

1.8

55.51

42.3

Associated Gene:

Gene:

TLN1

Ensembl Gene ID:

ENSAPLG00000004508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004681

13117449 - 13144432

26984