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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13194989_13195317_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13194989 - 13195317

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAGGTCGC

5'SS Class:

weak_major

3'SS Sequence:

GTTTTCTCCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAG

U12 Branch Point Sequence:

GTTTTCTCCATA

Flanking Amino Acid:

LMAATSRRSLHLYNISSSRG

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.4

Major BPS

40.6

-0.5

1.6

48.7

45.1

Major PPT

0.63

0.8

73.3

31.8

Minor 5ss

34.1

-1.8

3.2

39.1

39.8

Minor BPS

50.6

0.01

1.9

67.75

39.1

Associated Gene:

Gene:

RGP1

Ensembl Gene ID:

ENSAPLG00000006838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007113

13188672 - 13196168

7497