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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13195819_13195944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13195819 - 13195944

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTCAGTGCC

5'SS Class:

major

3'SS Sequence:

CTCTTGCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGCTGCTGACCC

Flanking Amino Acid:

SSTPGFTTNIVSLKWRLHFE

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.3

67.6

39.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

74.7

0.56

0.8

68.9

31.6

Minor 5ss

29.9

-2.3

37.8

39.6

Minor BPS

44.1

-0.4

2.1

52.58

44.5

Associated Gene:

Gene:

RGP1

Ensembl Gene ID:

ENSAPLG00000006838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007113

13188672 - 13196168

7497