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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13210801_13210894_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13210801 - 13210894

Intron Length:
94

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGCTGC

5'SS Class:
strong_major

3'SS Sequence:
TGCCGTCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGACAC

U12 Branch Point Sequence:
CGCTGCGTGACA

Flanking Amino Acid:
QDSGLREAFQTVLVITYYEP

Intron Amino Acid Position:
304

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84
0.8
0.9
69.2
38.5

Major BPS
46
-0.2
1.3
52.4
43.3

Major PPT
72.8
0.51
0.9
65.5
36.1

Minor 5ss
38.8
-1.3
3
50.2
46.4

Minor BPS
44.1
-0.4
2.4
54.41
44.7

Associated Gene:

Gene:
NPR2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13205265 - 13215689
10425