Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1321139_1323624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1321139 - 1323624

Intron Length:

2486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGAGCC

5'SS Class:

major

3'SS Sequence:

CTTCTGTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TTCTCTCTGACT

Flanking Amino Acid:

GPEGLQLQTLGCGTSFDFHK

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

61.5

38.4

Major BPS

69.1

0.47

60.7

37.6

Major PPT

77.1

0.61

0.9

72.6

36.4

Minor 5ss

30.4

-2.2

3.5

40.8

Minor BPS

65.8

0.58

1.7

83.75

37.4

Associated Gene:

Gene:

DNAI1

Ensembl Gene ID:

ENSAPLG00000002669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030587

1212321 - 1411437

199117

ENSAPLT00000002728

1274636 - 1411437

136802