Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13211764_13211846_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13211764 - 13211846

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTCTG

5'SS Class:

major

3'SS Sequence:

CCGCTGGGTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCCAT

U12 Branch Point Sequence:

GCCGTCCCATCC

Flanking Amino Acid:

GEGLRGCSRLRGPPPLDNPP

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

65.3

Major BPS

54.5

0.11

1.4

66.4

42.2

Major PPT

49.2

-0

1.2

47.1

39.5

Minor 5ss

39.3

-1.2

2.8

46.3

Minor BPS

36.8

-1

1.9

39.01

Associated Gene:

Gene:

NPR2

Ensembl Gene ID:

ENSAPLG00000025468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035735

13205265 - 13215689

10425