Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13213188_13213330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13213188 - 13213330

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

CTGCCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

GCTGCCTCCCCC

Flanking Amino Acid:

GWYCPRGSLQDILENESINL

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

70.6

0.46

0.8

61.7

34.9

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

33.7

-1.2

3.5

50.68

46.1

Associated Gene:

Gene:

NPR2

Ensembl Gene ID:

ENSAPLG00000025468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035735

13205265 - 13215689

10425