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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13213403_13213503_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13213403 - 13213503

Intron Length:
101

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACCCGAG

5'SS Class:
major

3'SS Sequence:
TGTCCGCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTCCAT

U12 Branch Point Sequence:
TCTGTCTGTCCG

Flanking Amino Acid:
RYSLINDIVKGMVFLHNSII

Intron Amino Acid Position:
622

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.8
0.35
1.3
54.3
45

Major BPS
62.1
0.3
1.4
72.5
43.5

Major PPT
68.4
0.41
0.9
58.3
38.4

Minor 5ss
40.2
-1.1
3.5
55.1
49.1

Minor BPS
33
-1.4
3.5
46.97
46.1

Associated Gene:

Gene:
NPR2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13205265 - 13215689
10425