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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13213664_13213752_F


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
13213664 - 13213752

Intron Length:
89

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTGAGCGCA

5'SS Class:
major

3'SS Sequence:
CGTGTCCCACCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCACCAT

U12 Branch Point Sequence:
CCTGCCTCACCA

Flanking Amino Acid:
DGEDTHALYAKKLWTAPELL

Intron Amino Acid Position:
675

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65
0.35
1.1
56.1
37.2

Major BPS
53
0.08
1.4
63
42.7

Major PPT
64.8
0.33
1
55.9
40.1

Minor 5ss
33.4
-1.9
3.3
44.4
44.2

Minor BPS
48.1
-0.1
2
58.78
47

Associated Gene:

Gene:
NPR2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13205265 - 13215689
10425