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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13214391_13214599_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
13214391 - 13214599

Intron Length:
209

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTGAGCGGG

5'SS Class:
major

3'SS Sequence:
TTTCCCCTGGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACCCAC

U12 Branch Point Sequence:
CCCCCCGGCACC

Flanking Amino Acid:
AENLLYQILPHSVAEQLKHG

Intron Amino Acid Position:
831

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.7
0.3
1.1
48.1
42.7

Major BPS
46.9
-0.1
1.1
53.7
32.6

Major PPT
77
0.61
0.9
73.5
31.4

Minor 5ss
32.5
-2
3.4
43
45.3

Minor BPS
38.2
-0.9
2.3
43.78
44.1

Associated Gene:

Gene:
NPR2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13205265 - 13215689
10425