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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13223635_13223725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13223635 - 13223725

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

CTGTCCCCATGG

Flanking Amino Acid:

TDVPASCLTVSPHLPGELAV

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

0.41

0.8

60.3

29.7

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

38.6

-1

2.2

43.87

47.6

Associated Gene:

Gene:

TAF1C

Ensembl Gene ID:

ENSAPLG00000030984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036559

13221317 - 13225694

4378

ENSAPLT00000034504

13221317 - 13225694

4378

ENSAPLT00000030273

13221317 - 13225694

4378

ENSAPLT00000024859

13221317 - 13225694

4378