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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13223850_13223948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13223850 - 13223948

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCCAC

U12 Branch Point Sequence:

GCCACCTTGTGT

Flanking Amino Acid:

QVGAARVDGEDFVGVRSDYH

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

42.9

-0.4

1.2

45.5

37.5

Major PPT

71.2

0.48

61.8

44.4

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

36.9

-0.9

3.5

56.08

46.4

Associated Gene:

Gene:

TAF1C

Ensembl Gene ID:

ENSAPLG00000030984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034504

13221317 - 13225694

4378

ENSAPLT00000030273

13221317 - 13225694

4378

ENSAPLT00000024859

13221317 - 13225694

4378

ENSAPLT00000036559

13221317 - 13225694

4378