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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13224555_13224641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13224555 - 13224641

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTACCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CCTTTTTTACCC

Flanking Amino Acid:

NFHLGDSKLKKPSRDTTIRM

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

76.3

0.59

0.8

69.6

31.1

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

57.8

0.22

1.6

64.58

42.1

Associated Gene:

Gene:

TAF1C

Ensembl Gene ID:

ENSAPLG00000030984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034504

13221317 - 13225694

4378