Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1328089_1347779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1328089 - 1347779

Intron Length:

19691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCGTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCTGTGCTAACT

Flanking Amino Acid:

SGKHTDPVWQVKWQKDDMDN

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

66.4

0.37

1.1

63.3

42.1

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

46.9

-0.1

2.4

71.51

45.7

Associated Gene:

Gene:

DNAI1

Ensembl Gene ID:

ENSAPLG00000002669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030587

1212321 - 1411437

199117

ENSAPLT00000002728

1274636 - 1411437

136802