Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13554072_13554853_F

Intron Information:

Intron Rank:

127883

Intron Class:

major

Intron Phase:

Intron Coordinates:

13554072 - 13554853

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCATTTGT

5'SS Class:

major

3'SS Sequence:

TCTGTGTCATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

GTTAGTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

71.6

40.9

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

60.6

0.24

1.1

65.1

40.4

Minor 5ss

37.4

-1.4

2.8

51.2

45.1

Minor BPS

64.3

0.53

1.8

81.36

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039281

13553686 - 13555938

2253