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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13772424_13775056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13772424 - 13775056

Intron Length:

2633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TGTGATTTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TCATCAGTCACT

Flanking Amino Acid:

FMKQVSKKFFGIFKTTRNMQ

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.2

39.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.2

0.59

0.9

73.1

41.8

Minor 5ss

43.5

-0.7

2.9

52.9

44.1

Minor BPS

45.2

-0.3

2.6

69.67

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031654

13772134 - 13775786

3653