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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13852201_13857512_F

Intron Information:

Intron Rank:

146550

Intron Class:

major

Intron Phase:

Intron Coordinates:

13852201 - 13857512

Intron Length:

5312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCT

5'SS Class:

major

3'SS Sequence:

TTGTTTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTGTTTTATGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

44.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.8

0.78

0.9

81.4

35.3

Minor 5ss

-2.1

3.6

47.9

47.8

Minor BPS

48.9

-0.1

1.9

64.74

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033188

13850325 - 13857885

7561

ENSAPLT00000030437

13827059 - 13857885

30827