Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1394977_1396048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1394977 - 1396048

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACTC

5'SS Class:

strong_major

3'SS Sequence:

TATTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TACTACTCTATT

Flanking Amino Acid:

KDEEGTEDTQAEGEEEAEEA

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.8

38.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

87.8

0.85

0.7

85.4

28.9

Minor 5ss

36.6

-1.5

3.2

51.3

45.2

Minor BPS

-0.1

66.29

44.4

Associated Gene:

Gene:

DNAI1

Ensembl Gene ID:

ENSAPLG00000002669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030587

1212321 - 1411437

199117

ENSAPLT00000002728

1274636 - 1411437

136802