Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1402183_1411404_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1402183 - 1411404

Intron Length:

9222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTGCTTATGT

Flanking Amino Acid:

PAKGGDKQRQSQSGPSGGKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.1

0.68

0.9

77.2

37.1

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

50.6

0.1

2.3

76.39

Associated Gene:

Gene:

DNAI1

Ensembl Gene ID:

ENSAPLG00000002669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030587

1212321 - 1411437

199117

ENSAPLT00000002728

1274636 - 1411437

136802