Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_14066184_14067099_F

Intron Information:

Intron Rank:

148534

Intron Class:

major

Intron Phase:

Intron Coordinates:

14066184 - 14067099

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTGG

5'SS Class:

major

3'SS Sequence:

CTTTCAATACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

62.4

44.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.9

0.49

64.3

40.4

Minor 5ss

43.4

-0.7

2.9

52.7

46.4

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026416

14035041 - 14067158

32118