Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1411852_1468541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1411852 - 1468541

Intron Length:

56690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

TATATCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTGTTTTATAT

Flanking Amino Acid:

PAVRAEMQPLDPTAASISDR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.3

40.2

Major BPS

79.2

0.73

75.3

39.4

Major PPT

75.8

0.58

0.9

69.3

36.5

Minor 5ss

31.4

-2.1

3.3

37.8

42.4

Minor BPS

54.6

0.22

1.8

76.11

Associated Gene:

Gene:

FAM219A

Ensembl Gene ID:

ENSAPLG00000002655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002679

1411146 - 1506152

95007