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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_14320249_14328090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14320249 - 14328090

Intron Length:

7842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTGGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TCTCTCTGGATA

Flanking Amino Acid:

VVLICSIPLVVRVFVNQLYQ

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.8

79.3

28.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

66.6

0.37

64.5

36.6

Minor 5ss

30.7

-2.2

2.6

33.5

35.6

Minor BPS

53.6

0.11

1.4

63.74

36.6

Associated Gene:

Gene:

PTGER4

Ensembl Gene ID:

ENSAPLG00000017436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020345

14319418 - 14328718

9301