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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_14473462_14474315_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14473462 - 14474315

Intron Length:
854

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGCTGGAG

5'SS Class:
major

3'SS Sequence:
CACACCTATCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATGCAT

U12 Branch Point Sequence:
TTATGCATAACT

Flanking Amino Acid:
AMKCSGIRLENLGRVTCKQG

Intron Amino Acid Position:
932

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.2
0.34
1.1
53
39.9

Major BPS
67.2
0.43
1.4
77.7
37.1

Major PPT
64.4
0.32
1
54.3
40.1

Minor 5ss
22.1
-3.2
3.4
28.4
43.9

Minor BPS
63.6
0.5
2.1
86.11
39.5

Associated Gene:

Gene:
C6

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14473200 - 14500336
27137