Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_14494036_14494704_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14494036 - 14494704

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATGATG

5'SS Class:

major

3'SS Sequence:

TTCTCTGACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTTCTCTGACG

Flanking Amino Acid:

NCKNKFQCESGRCIAKKLEC

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

42.5

Major BPS

0.62

1.4

85.7

34.9

Major PPT

73.2

0.52

0.9

69.1

Minor 5ss

36.1

-1.6

3.3

45.6

43.7

Minor BPS

65.5

0.34

1.7

75.39

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022676

14471638 - 14498961

27324

ENSAPLT00000022345

14471638 - 14500336

28699

ENSAPLT00000010327

14473200 - 14500336

27137