Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_14497385_14498103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14497385 - 14498103

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCA

5'SS Class:

major

3'SS Sequence:

TTACATTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

CCTCTTTCAATT

Flanking Amino Acid:

TCNYGTQTRHRQIRMDEYYN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

63.2

42.9

Major BPS

73.9

0.59

30.2

Major PPT

79.2

0.66

0.8

77.6

36.2

Minor 5ss

29.6

-2.3

3.4

39.1

46.2

Minor BPS

50.6

0.1

1.5

64.38

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022345

14471638 - 14500336

28699

ENSAPLT00000010327

14473200 - 14500336

27137

ENSAPLT00000022676

14471638 - 14498961

27324