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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_14710760_14711521_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14710760 - 14711521

Intron Length:
762

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTATGTAAC

5'SS Class:
major

3'SS Sequence:
CTTCTCTTGCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAT

U12 Branch Point Sequence:
GATATGCTAATT

Flanking Amino Acid:
SSDESFAMIRGGHVDLTMLG

Intron Amino Acid Position:
391

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
74
36.6

Major BPS
79.3
0.73
1.1
77.9
34.9

Major PPT
78.3
0.64
0.9
72.7
37.5

Minor 5ss
41.7
-0.9
2.5
45.5
42.9

Minor BPS
44.1
-0.3
2.2
63.08
41

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14694657 - 14765186
70530

14679340 - 14765208
85869

14679340 - 14755000
75661