Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_14776706_14777098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14776706 - 14777098

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGCCT

5'SS Class:

major

3'SS Sequence:

CTTGTTTCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TATTCTTGCATT

Flanking Amino Acid:

PSKLLQLYTQAVLDITYFEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

59.8

44.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

77.1

0.61

0.8

73.2

31.7

Minor 5ss

32.1

-2

3.6

48.5

47.2

Minor BPS

55.6

0.26

1.9

77.76

Associated Gene:

Gene:

C5orf51

Ensembl Gene ID:

ENSAPLG00000011429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022551

14764587 - 14779718

15132

ENSAPLT00000011898

14776197 - 14780191

3995