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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_14778288_14779431_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

14778288 - 14779431

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTTGGTAAC

5'SS Class:

weak_major

3'SS Sequence:

ATTATTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TTGATCTGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.3

58.1

41.2

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

83.5

0.75

0.8

77.9

35.7

Minor 5ss

32.3

-2

2.8

34.2

Minor BPS

62.9

0.48

1.5

77.16

39.6

Associated Gene:

Gene:

FBXO4

Ensembl Gene ID:

ENSAPLG00000023011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024959

14778196 - 14786818

8623