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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15151392_15155569_F

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
15151392 - 15155569
Intron Length:
4178

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAACACA
5'SS Class:
strong_major
3'SS Sequence:
AAATGCTTTACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TGTTTAT
U12 Branch Point Sequence:
TGAATCTTAACC
Flanking Amino Acid:
MLEAIKALEIRNKENSSPLE
Intron Amino Acid Position:
156

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
80.9
0.73
1
74
36.5
Major BPS
81.3
0.78
1.1
71.7
44.6
Major PPT
70.5
0.46
1
61.9
43.4
Minor 5ss
39
-1.2
2.9
49.8
46.2
Minor BPS
70.6
0.63
1.3
72.82
37.5

Associated Gene:

Gene:
ZNF131
Ensembl Gene ID:
ENSAPLG00000026432
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000028939
15148048 - 15164681
16634
ENSAPLT00000022863
15146714 - 15164681
17968
ENSAPLT00000021689
15148048 - 15163639
15592
ENSAPLT00000043880
15146714 - 15164681
17968
ENSAPLT00000016133
15143324 - 15163639
20316
ENSAPLT00000039152
15148058 - 15164681
16624