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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1516684_1517391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1516684 - 1517391

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACACC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

ACCTGGGCATCT

Flanking Amino Acid:

LWKENKFVTQGLTVPQDRNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.1

37.7

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

71.4

0.48

0.9

62.8

39.7

Minor 5ss

-1.1

2.9

52.8

44.1

Minor BPS

29.2

-1.5

2.6

45.41

46.1

Associated Gene:

Gene:

C9orf24

Ensembl Gene ID:

ENSAPLG00000007506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007780

1516546 - 1519930

3385