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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15179466_15185060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15179466 - 15185060

Intron Length:

5595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTCTTCATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

74.8

38.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.1

0.45

0.9

69.3

36.9

Minor 5ss

34.2

-1.8

2.8

40.6

45.6

Minor BPS

59.9

0.39

1.8

79.81

42.6

Associated Gene:

Gene:

NIM1K

Ensembl Gene ID:

ENSAPLG00000015565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016220

15179370 - 15196272

16903