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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1518287_1518398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1518287 - 1518398

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAACTGCC

5'SS Class:

major

3'SS Sequence:

CTTCTGCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

CGCCCCTTATCC

Flanking Amino Acid:

PPKPACLNQYEREVVADMLR

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.2

65.5

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

82.7

0.74

0.8

76.6

Minor 5ss

-1.1

3.2

54.3

42.9

Minor BPS

55.2

0.14

1.7

60.42

44.6

Associated Gene:

Gene:

C9orf24

Ensembl Gene ID:

ENSAPLG00000007506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007780

1516546 - 1519930

3385